PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678364019
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family DBB
Protein Properties Length: 286aa    MW: 32091.3 Da    PI: 6.4932
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678364019genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.61e-07443538
   zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                C+ +e++ ++ fC  ++  lC dC    H+       H+
  678364019  4 LCDVCEKNGASVFCAADEAALCVDCDRRVHHAnklagkHQ 43
               7**************************9964446777776 PP

2zf-B_box31.34.2e-105592338
   zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38
                ++C+ ++e ++ lfC++++  lC+dC +++H+   Ht
  678364019 55 STVCDICKERRAFLFCQQDRAILCRDCDVSIHRTnkHT 92
               579*****************************778854 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.893147IPR000315B-box-type zinc finger
PfamPF006438.4E-6344IPR000315B-box-type zinc finger
CDDcd000215.90E-7347No hitNo description
SMARTSM003366.7E-10447IPR000315B-box-type zinc finger
SMARTSM003366.6E-1453100IPR000315B-box-type zinc finger
PROSITE profilePS5011910.2815396IPR000315B-box-type zinc finger
PfamPF006435.9E-85492IPR000315B-box-type zinc finger
CDDcd000212.82E-1056100No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009641Biological Processshade avoidance
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MKILCDVCEK NGASVFCAAD EAALCVDCDR RVHHANKLAG KHQRFSIERP SSRDSTVCDI  60
CKERRAFLFC QQDRAILCRD CDVSIHRTNK HTQMHTRFLL IGLRVSSAPS SYSSSQEADS  120
FPTNVNCVSS KVAVDDNSNA NLMSASNISD HLLETVPGWQ FEDYFIDSSP PPYVLSKELN  180
NEQVLPMMGT EMPTNLCSFT SEELGFWVPQ STLYPTQSHP SHSIEPPFKS TTGTEEHFAK  240
KLKKRWIEDC CPLVPDLPEC FQVPASFFAF ANGEKLASKK PRLPNF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835698.16e-73PREDICTED: B-box zinc finger protein 21-like
SwissprotQ9LQZ73e-60BBX21_ARATH; B-box zinc finger protein 21
TrEMBLA0A022RFS16e-73A0A022RFS1_ERYGU; Uncharacterized protein
STRINGGLYMA17G37430.23e-67(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14632364
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75540.17e-59salt tolerance homolog2